Python Modules for Circos Plot
1. Pre Installation
As official, Pyhton2 will end life form 2020-1-1, So we develop a new version support Python3.5+, We deeply recommand all users using the python version 3.5+, Thx!
Python 3.5+ packages(automatically installed)
- numpy
- pandas
- matplotlib
2. Installation
intall dev branch
- install from source code
git clone https://github.com/KimBioInfoStudio/PyCircos.git
cd PyCircos
pip install -r requirements.txt
python3 setup.py install [--user]
- or install form source code with using 'make'
git clone https://github.com/KimBioInfoStudio/PyCircos.git
cd PyCircos
make install
- install release branch
pip install pycircos
3. Examples
command
cd ./test/
python3 test.py
open ./demo.png