Python whole slide image analysis toolkit


Keywords
computational-pathology, deep-learning, image-analysis, pathology, python, whole-slide-imaging
License
MIT
Install
pip install pyslide==0.4.5

Documentation

pyslide - Python whole slide image analysis toolkit

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Installation

To install pyslide, apt dependences before pip:

sudo apt-get install openslide-tools
sudo apt-get install libgeos-dev
pip install -r requirements.txt
pip install pyslide==0.5.0

Usage

Documentation

Hosted in https://pyslide.readthedocs.io, powered by readthedocs and Sphinx.

License

pyslide is free software made available under the MIT License. For details see the LICENSE file.

Contributors

See the AUTHORS.md file for a complete list of contributors to the project.

Contributing

pyslide is an open source project and all whole slide image analysis related functions are very welcome to contribute. An easy way to get started is by suggesting a new enhancement on the Issues. If you have found a bug, then either report this through Issues, or even better, make a fork of the repository, fix the bug and then create a Pull Request to get the fix into the master branch.