SAVNet

Introduction

SAVNet is a software for extracting splicing associated variants (SAVs) from somatic mutation, splicing junction and intron retention data. This software has been used for large-scale exome-transcriptome sequence analysis:

A comprehensive characterization of cis-acting splicing-associated variants in human cancer, Shiraishi et al., Genome Research, 2018, [link].

Documentation

The documentation for SAVNet is available here.