ScienceBeam Utils

Provides sequence alignment utility functions to ScienceBeam projects.

Pre-requisites

• Python 2 or 3

Dependencies

Dependencies can be installed by running:

pip install -r requirements.txt

and:

pip install -r requirements.dev.txt

Cython

Run:

python setup.py build_ext --inplace

Tests

Unit tests are written using pytest. Run for example pytest or pytest-watch.