Structure Ensemble Inference by Sequencing, Mutation Identification, and Clustering of RNA
SEISMIC-RNA analyzes data from RNA mutational profiling experiments, such as DMS-MaPseq and SHAPE-MaP. This software introduces an optimized implementation of the algorithm DREEM for detecting and quantifying RNA structure ensembles.
Documentation for installing and using SEISMIC-RNA is available on GitHub Pages.
The issue page of the GitHub repository is the official location for reporting bugs and other issues. Before opening a new issue, please check if a similar issue already exists.
SEISMIC-RNA has been developed by the following individuals in the lab of Silvi Rouskin at Harvard Medical School:
