SHAP-based Mircrobiome Analysis Tool (SHAPMAT)
Leveraging Explainable AI for Microbiome Data Analysis
View Tutorial
About The Project
SHAPMAT leverages SHAP (SHapley Additive exPlanations) for microbiome data analyese that includes local explanation-based feature importance analysis and phenotype subytping/clustering.
Getting Started
This is an example of how you may give instructions on setting up your project locally. To get a local copy up and running follow these simple example steps.
Prerequisites
Please check the requirements.txt file for the required dependencies.
Installation
Use pip to install this library:
pip install shapmat
License
Distributed under the MIT License. See LICENSE.txt for more information.
Contact
Ryza Rynazal - Email
