sinto: tools for single-cell data processing


Keywords
bioinformatics, single-cell
License
MIT
Install
pip install sinto==0.7.2.2

Documentation

Sinto: single-cell analysis tools

https://pepy.tech/badge/sinto

Sinto is a toolkit for processing aligned single-cell data. Sinto includes functions to:

  • Subset reads from a BAM file by cell barcode
  • Create a scATAC-seq fragments file from a BAM file
  • Add read tags to a BAM file according to cell barcode information

Read the documentation at https://timoast.github.io/sinto