chemexpy

Cheminformatics package for compound feature evaluation


Keywords
cheminformatics
License
GPL-3.0
Install
pip install chemexpy==1.0.10

Documentation

version tests

Documentation for chemexpy package

Package version: v1.0.0

Date: 10/06/2021

Author: Auste Kanapeckaite

The package contains the following functions:

  1. data_prep
  2. molecule_check
  3. scatter_plot
  4. correlation_plot
  5. feature_plot
  6. normality_check
  7. feature_check
  8. feature_violinplots
  9. similarity_search
  10. similarity_dendogram
  11. similarity_heatmap

Dependencies:

rdkit, pandas, numpy, scipy, seaborn, matplotlib, collections

Introduction

Chemexpy package provides a user-friendly and organised approach to explore chemical libraries and identify key features. The information generated by the package functions can be easily integrated into other pipelines or downstream processing. Package provides exploratory plots as well as compound similarity assessment or search for similar compounds. Moreover, there are several additional functions to easily extract chemical descriptors and evaluate chemical libraries.