pyABIF
A Python ABIF (Applied Biosystems Genetic Analysis Data File Format) reader.
- no external dependencies
- minimal pythonification
ABIF is a directory of items, where every item is identified by unique name and number.
pyABIF is a class with attributes corresponding to name/number items:
>>> from pyabif import pyABIF >>> abif = pyABIF('abif.fsa') >>> abif.User1 joe >>> abif.DATA1
pyabif can be used as a console script:
$ pyabif abif.fsa
Converted to txt
$ ls abif
abif.fsa
abif.fsa.csv.zip