NCBI Pubmed Toolkits

Requirements

• Python3.6+

Installation

python3 -m pip install -U pypubmed

Usage

search

search Pubmed with term

pypubmed search --help

# do not translate
pypubmed search -l 5 ngs

# translate with a local proxies
pypubmed -p http://127.0.0.1:1081 search ngs -l 5

advance-search

advance search builder

pypubmed advance-search --help

citations

generate citations for given PMID

pypubmed citations --help

Todos

• HTML output
• PDF downloader
• GUI application
• Local paper manager

Documents

https://pypubmed.readthedocs.io/en/latest/