Snakemake plugin executor with special values for GUstave Roussy's Flamingo
pip install snakemake-executor-plugin-slurm-gustave-roussy==0.3.0
Snakemake plugin executor designed to match Gustave Roussy computing cluster specificities : automatic partition seleciton, and default resources value.
Checkout the profile given on the cluster to automatically activate this executor with your pipeline:
snakemake --profile /mnt/beegfs/pipelines/unofficial-snakemake-wrappers/profiles/slurm-web ...
For documentation, see the Snakemake plugin catalog.
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